vg
tools for working with variation graphs
Loading...
Searching...
No Matches
vg::JoinedSpliceGraph Member List

This is the complete list of members for vg::JoinedSpliceGraph, including all inherited members.

flip(const handle_t &handle) constvg::JoinedSpliceGraph
follow_edges_impl(const handle_t &handle, bool go_left, const function< bool(const handle_t &)> &iteratee) constvg::JoinedSpliceGraph
for_each_handle_impl(const function< bool(const handle_t &)> &iteratee, bool parallel=false) constvg::JoinedSpliceGraph
get_base(const handle_t &handle, size_t index) constvg::JoinedSpliceGraph
get_handle(const id_t &node_id, bool is_reverse=false) constvg::JoinedSpliceGraph
get_id(const handle_t &handle) constvg::JoinedSpliceGraph
get_is_reverse(const handle_t &handle) constvg::JoinedSpliceGraph
get_length(const handle_t &handle) constvg::JoinedSpliceGraph
get_node_count() constvg::JoinedSpliceGraph
get_sequence(const handle_t &handle) constvg::JoinedSpliceGraph
get_subsequence(const handle_t &handle, size_t index, size_t size) constvg::JoinedSpliceGraph
handle_idxsvg::JoinedSpliceGraphprivate
has_node(id_t node_id) constvg::JoinedSpliceGraph
JoinedSpliceGraph(const HandleGraph &parent_graph, const IncrementalSubgraph &left_subgraph, handle_t left_splice_node, size_t left_splice_offset, const IncrementalSubgraph &right_subgraph, handle_t right_splice_node, size_t right_splice_offset)vg::JoinedSpliceGraph
JoinedSpliceGraph()=defaultvg::JoinedSpliceGraph
left_handle_transvg::JoinedSpliceGraphprivate
left_seed_node() constvg::JoinedSpliceGraph
left_splice_node() constvg::JoinedSpliceGraph
left_splice_offsetvg::JoinedSpliceGraphprivate
left_subgraphvg::JoinedSpliceGraphprivate
max_link_length() constvg::JoinedSpliceGraph
max_node_id() constvg::JoinedSpliceGraph
min_link_length() constvg::JoinedSpliceGraph
min_node_id() constvg::JoinedSpliceGraph
num_left_handlesvg::JoinedSpliceGraphprivate
parent_graphvg::JoinedSpliceGraphprivate
right_handle_transvg::JoinedSpliceGraphprivate
right_seed_node() constvg::JoinedSpliceGraph
right_splice_node() constvg::JoinedSpliceGraph
right_splice_offsetvg::JoinedSpliceGraphprivate
right_subgraphvg::JoinedSpliceGraphprivate
translate_node_ids(Path &path) constvg::JoinedSpliceGraph
underlying_interval(const handle_t &handle) constvg::JoinedSpliceGraphprivate
~JoinedSpliceGraph()=defaultvg::JoinedSpliceGraph
Generated by   doxygen 1.17.0