vg
tools for working with variation graphs
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vg::MemoizingGraph Member List

This is the complete list of members for vg::MemoizingGraph, including all inherited members.

flip(const handle_t &handle) constvg::MemoizingGraphvirtual
follow_edges_impl(const handle_t &handle, bool go_left, const function< bool(const handle_t &)> &iteratee) constvg::MemoizingGraphvirtual
for_each_handle_impl(const function< bool(const handle_t &)> &iteratee, bool parallel=false) constvg::MemoizingGraphvirtual
for_each_path_handle_impl(const std::function< bool(const path_handle_t &)> &iteratee) constvg::MemoizingGraphprotectedvirtual
for_each_step_on_handle_impl(const handle_t &handle, const std::function< bool(const step_handle_t &)> &iteratee) constvg::MemoizingGraphprotectedvirtual
for_each_step_position_on_handle(const handle_t &handle, const std::function< bool(const step_handle_t &, const bool &, const size_t &)> &iteratee) constvg::MemoizingGraphprotectedvirtual
get_handle(const id_t &node_id, bool is_reverse=false) constvg::MemoizingGraphvirtual
get_handle_memovg::MemoizingGraphprivate
get_handle_of_step(const step_handle_t &step_handle) constvg::MemoizingGraphvirtual
get_id(const handle_t &handle) constvg::MemoizingGraphvirtual
get_is_circular(const path_handle_t &path_handle) constvg::MemoizingGraphvirtual
get_is_reverse(const handle_t &handle) constvg::MemoizingGraphvirtual
get_length(const handle_t &handle) constvg::MemoizingGraphvirtual
get_next_step(const step_handle_t &step_handle) constvg::MemoizingGraphvirtual
get_node_count() constvg::MemoizingGraphvirtual
get_path_count() constvg::MemoizingGraphvirtual
get_path_handle(const std::string &path_name) constvg::MemoizingGraphvirtual
get_path_handle_of_step(const step_handle_t &step_handle) constvg::MemoizingGraphvirtual
get_path_length(const path_handle_t &path_handle) constvg::MemoizingGraphvirtual
get_path_name(const path_handle_t &path_handle) constvg::MemoizingGraphvirtual
get_position_of_step(const step_handle_t &step) constvg::MemoizingGraphvirtual
get_previous_step(const step_handle_t &step_handle) constvg::MemoizingGraphvirtual
get_sequence(const handle_t &handle) constvg::MemoizingGraphvirtual
get_step_at_position(const path_handle_t &path, const size_t &position) constvg::MemoizingGraphvirtual
get_step_count(const path_handle_t &path_handle) constvg::MemoizingGraphvirtual
graphvg::MemoizingGraphprivate
has_next_step(const step_handle_t &step_handle) constvg::MemoizingGraphvirtual
has_node(id_t node_id) constvg::MemoizingGraphvirtual
has_path(const std::string &path_name) constvg::MemoizingGraphvirtual
has_previous_step(const step_handle_t &step_handle) constvg::MemoizingGraphvirtual
is_empty(const path_handle_t &path_handle) constvg::MemoizingGraphvirtual
max_handle_memo_sizevg::MemoizingGraph
max_node_id() constvg::MemoizingGraphvirtual
max_steps_of_handle_memo_sizevg::MemoizingGraph
MemoizingGraph(const PathPositionHandleGraph *graph)vg::MemoizingGraph
MemoizingGraph()=defaultvg::MemoizingGraph
min_node_id() constvg::MemoizingGraphvirtual
path_back(const path_handle_t &path_handle) constvg::MemoizingGraphvirtual
path_begin(const path_handle_t &path_handle) constvg::MemoizingGraphvirtual
path_end(const path_handle_t &path_handle) constvg::MemoizingGraphvirtual
path_front_end(const path_handle_t &path_handle) constvg::MemoizingGraphvirtual
steps_of_handle(const handle_t &handle, bool match_orientation=false) constvg::MemoizingGraphvirtual
steps_of_handle_memovg::MemoizingGraphprivate
~MemoizingGraph()=defaultvg::MemoizingGraph